Manual Genomics Protocols

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  1. Functional Genomics - Methods and Protocols | Michael Kaufmann | Springer
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Functional Genomics - Methods and Protocols | Michael Kaufmann | Springer

In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript. Help us improve our products. Sign up to take part. A Nature Research Journal. A suite of tools has been built to allow users to browse and query gene functions and analyze large-scale experimental data with a number of statistical tests.

Since the protocol for using this tool v.

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Mi, H. Nucleic Acids Res. Venter, J. The sequence of the human genome. Science , — Thomas, P. Genome Res. PANTHER: a browsable database of gene products organized by biological function, using curated protein family and subfamily classification. Gaudet, P.

Secondary Genomics Findings Service

Phylogenetic-based propagation of functional annotations within the gene ontology consortium. UniProt Consortium. UniProt: the universal protein knowledgebase. The Gene Ontology Consortium. Expansion of the gene ontology knowledgebase and resources.

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Fabregat, A. The Reactome pathway knowledgebase. Cerami, E. The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data. Cancer Discov.

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Kanehisa, M. New approach for understanding genome variations in KEGG. Caspi, R. Slenter, D. WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research. Kerrien, S. The intact molecular interaction database in Chatr-Aryamontri, A. The biogrid interaction database: update.

Plant Genomics Methods and Protocols Methods in Molecular Biology

Benjamini, Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. Series B Methodol. Finn, R. InterPro in beyond protein family and domain annotations.

Methods Mol. Clark, A. Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios. Eddy, S. A new generation of homology search tools based on probabilistic inference. Advertisement Hide.

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Genomics Protocols. Front Matter Pages i-xv. Pages BeadArray-Based Genotyping. Byung-Kwan Cho, Eric M. Marina Bibikova, Joanne M.

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Arsalan S. Haqqani, John F. Kelly, Danica B. Coimmunoprecipitation and Proteomic Analyses.